Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
THCA | rs61984520 | chr14:59816182 | C/G | 0.000173 | 487 | 16.25 | 15 | 5.8 | KM Plot |
THCA | rs61984521 | chr14:59820189 | C/T | 0.000221 | 486 | 16.25 | 15 | 5.8 | KM Plot |
THCA | rs61984524 | chr14:59824249 | C/G | 0.000173 | 488 | 16.3 | 14.9 | 5.8 | KM Plot |
THCA | rs61984526 | chr14:59831428 | T/C | 0.000222 | 490 | 16.25 | 14.9 | 5.45 | KM Plot |
THCA | rs61984529 | chr14:59841236 | G/T | 0.00018 | 485 | 16.2 | 14.9 | 5.45 | KM Plot |
THCA | rs61984530 | chr14:59844320 | A/G | 0.000182 | 486 | 16.2 | 15 | 5.45 | KM Plot |
THCA | rs61984532 | chr14:59846757 | G/A | 0.000182 | 486 | 16.2 | 15 | 5.45 | KM Plot |
THCA | rs61984533 | chr14:59847613 | T/C | 0.000127 | 485 | 16.25 | 15 | 5.45 | KM Plot |
THCA | rs61984534 | chr14:59848499 | C/T | 0.000183 | 485 | 16.25 | 15 | 5.45 | KM Plot |
THCA | rs61984535 | chr14:59852007 | C/T | 0.000184 | 485 | 16.3 | 15 | 5.45 | KM Plot |
THCA | rs61984536 | chr14:59852262 | C/T | 0.000138 | 484 | 16.2 | 15 | 5.45 | KM Plot |
THCA | rs61984537 | chr14:59852500 | T/C | 0.000226 | 484 | 16.3 | 15 | 5.45 | KM Plot |
THCA | rs61984545 | chr14:59856978 | G/A | 0.000167 | 486 | 16.3 | 15 | 5.45 | KM Plot |
THCA | rs61985462 | chr14:59858837 | T/C | 0.000168 | 486 | 16.33 | 14.9 | 5.45 | KM Plot |
THCA | rs61985463 | chr14:59860572 | C/T | 0.000166 | 482 | 16.33 | 15 | 5.45 | KM Plot |